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Datasets

Data for scientific machine learning

9 resources

SPICE

Dataset

SPICE provides quantum-mechanical energies, forces and other molecular properties for training machine learning potentials, with an emphasis on drug-like molecules and protein interactions.

Open source

Quantum Chemistry · Scientific Data

ANI-1

Dataset

ANI-1 provides calculated off-equilibrium molecular conformations, with Python readers for accessing HDF5 files containing coordinates and energies for organic molecules.

Open sourcePython

Quantum Chemistry

GEOM

Dataset

GEOM provides 37 million energy- and statistical-weight-annotated molecular conformations for over 450,000 molecules, with MessagePack data, RDKit objects, and loading and analysis tutorials.

Python

Molecular Generation · Computational Chemistry

Matbench Discovery benchmarks machine-learning models for crystal stability and atomistic simulation tasks, using an interactive leaderboard to compare accuracy, robustness, and computational cost.

Open sourcePython

Materials Discovery

Matbench

Dataset

Matbench provides 13 curated materials-science machine learning tasks for benchmarking property-prediction methods, with benchmark data, leaderboards and a pip-installable package.

Open sourcePython

Materials Discovery

Open Reaction Database provides structured reaction datasets as Parquet files containing Protobuf records, with mirrored downloads and ord_schema workflows for streaming access and text or JSON conversion.

Open sourcePython

Reaction Prediction · Scientific Data

Therapeutics Data Commons provides therapeutic machine learning datasets, Python loaders, data splits, evaluation metrics and benchmarks for prediction and molecule-generation research.

Open sourcePython

Molecular Property Prediction · Drug Discovery

MOSES

Dataset

MOSES combines a ZINC-derived molecular dataset, generation baselines and evaluation metrics to benchmark the validity, diversity and novelty of generated molecules.

Open sourcePython

Molecular Generation

GuacaMol

Dataset

GuacaMol is a Python benchmarking package for de novo molecular design, with distribution-learning and goal-directed evaluations plus standardized ChEMBL-derived datasets.

Open sourcePython

Molecular Generation